Introduction to running R, Python, Julia and MATLAB in HPC

Pre-requirements:

Pre-requirements

COMMON:

Log in session
Desktop On Demand
Use the tarball with exercises

Python Lessons:

Introduction Python
Load and run python
Python packages
Isolated environments
Running Python in batch mode
Using GPUs with Python
Interactive work on the compute nodes
Jupyter on compute nodes
Parallel and multithreaded functions
Conda at UPPMAX
Summary
Evaluation

Julia Lessons:

Introduction Julia
Load and run Julia
Packages and isolated environments
Running Julia in batch mode
Parallel and multithreaded functions
Sessions: Interactive work on compute nodes
Summary
Evaluation

R Lessons:

Introduction R
Load and run R
Packages
Isolated environments with renv
Running R in batch mode
Parallel and multithreaded functions
Interactive work on the compute nodes
Using RStudio
ML with R
Summary
Evaluation

Matlab Lessons:

Introduction to MATLAB
Load and Run MATLAB
Slurm job scheduler and MATLAB in terminal
MATLAB GUI and SLURM
Parallel and multithreaded functions
Add-Ons
Session-UPPMAX: Matlab client on the desktop
Session: Matlab in Jupyter
Summary
Evaluation

Extra reading:

Isolated environments, extra exercises
More about R packages
Packages at Bianca (parallel session)
Extra reading about MATLAB in HPC
- Interaction with other tools

Introduction to running R, Python, Julia and MATLAB in HPC

Extra reading about MATLAB in HPC
Edit on GitHub

Extra reading about MATLAB in HPC

Interaction with other tools

gurobi…

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