Introduction to running R, Python, Julia and MATLAB in HPC
Pre-requirements:
Pre-requirements
COMMON:
Log in session
Desktop On Demand
Use the tarball with exercises
R Lessons:
Introduction R
Load and run R
Packages
Isolated environments with
renv
Running R in batch mode
Parallel and multithreaded functions
Interactive work on the compute nodes
Using RStudio
ML with R
Summary
Evaluation
Matlab Lessons:
Introduction to MATLAB
Load and Run MATLAB
Slurm job scheduler and MATLAB in terminal
MATLAB GUI and SLURM
Parallel and multithreaded functions
Add-Ons
Session-UPPMAX: Matlab client on the desktop
Session: Matlab in Jupyter
Summary
Evaluation
Julia Lessons:
Introduction Julia
Load and run Julia
Packages and isolated environments
Running Julia in batch mode
Parallel and multithreaded functions
Sessions: Interactive work on compute nodes
Summary
Evaluation
Extra reading:
Isolated environments, extra exercises
More about R packages
Packages at Bianca (parallel session)
Extra reading about MATLAB in HPC
Introduction to running R, Python, Julia and MATLAB in HPC
Index
Edit on GitHub
Index