Introduction to running R, Python, Julia and MATLAB in HPC
Pre-requirements:
Pre-requirements
COMMON:
Log in session
Desktop On Demand
Use the tarball with exercises
R Lessons:
Introduction R
Load and run R
Packages
Isolated environments with
renv
Running R in batch mode
Parallel and multithreaded functions
Interactive work on the compute nodes
Using RStudio
ML with R
Summary
Evaluation
Matlab Lessons:
Introduction to MATLAB
Load and Run MATLAB
Slurm job scheduler and MATLAB in terminal
MATLAB GUI and SLURM
Parallel and multithreaded functions
Add-Ons
Session-UPPMAX: Matlab client on the desktop
Session: Matlab in Jupyter
Summary
Evaluation
Julia Lessons:
Introduction Julia
Load and run Julia
Packages and isolated environments
Running Julia in batch mode
Parallel and multithreaded functions
Sessions: Interactive work on compute nodes
Summary
Evaluation
Extra reading:
Isolated environments, extra exercises
More about R packages
Packages at Bianca (parallel session)
Extra reading about MATLAB in HPC
Interaction with other tools
Introduction to running R, Python, Julia and MATLAB in HPC
Extra reading about MATLAB in HPC
Edit on GitHub
Extra reading about MATLAB in HPC
Interaction with other tools
gurobi…