Lesson plan R by Richel

  • Date: Tuesday 2025-10-06
  • Course: R

2025-09-17

I was happy with my progress on the advanced day and started working on the MkDocs website.

2025-09-18

I continued working on the MkDocs website. All CI tests are back.

All CI tests pass now. As the session about parallelism has more unknown, I will now focus on that one first.

2025-09-22

Parallelism is in good enough shape, with no unknowns left. Let’s remove the unknowns from this session too.

Progress is clear from the lesson material:

HPC Cluster Documentation
Alvis Only OpenOnDemand doc
Berzelius As good as no documentation
Bianca Documentation
COSMOS No documentation
Dardel No documentation
Kebnekaise Reasonable documentation
LUMI No documentation
Pelle Documentation
Rackham Documentation
Tetralith As good as no documentation, use UPPMAX docs
Vera Only OpenOnDemand doc

There are, however, videos, that are not based on user documentation:

  • COSMOS RStudio
    • OpenOnDemand CPU setup: I will use this one
    • OpenOnDemand GPU setup
    • From terminal
  • HPC2N RStudio
    • From terminal, no interactive session
    • I will use: interactive session from terminal

Those videos will make it easy to write that user documentation.

2025-09-23

All is done, except:

  • [x] RStudio video Pelle, reported at UPPMAX that ThinLinc cannot connect

2025-09-24

Done!